Planning

Week Wed. 19 Thu. 20 Fri. 21 List

	Wed. 19	Thu. 20	Fri. 21
09:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00 18:00 19:00 20:00 21:00 22:00	Welcome Words, Organisation 13:30 - 13:45 (15min) Welcome Words, Organisation Amphi Sophie Germain Gilles Truan Tools and techniques, methodology (Design & Build) 13:45 - 16:00 (2h15) Tools and techniques, methodology (Design & Build) Amphi Sophie Germain Gilles Truan › Accelerating the engineering of biological systems through foundational technologies and AI - Geoff Baldwin, Department of Bioengineering [Imperial College London] 13:45-14:30 (45min) › Designing replicons: rules from the maintenance functions - Francois Cornet, Centre de Biologie Intégrative 14:30-15:00 (30min) › Multimodal perceptron for biosensors - Mahnaz Sabeti azad, Micalis 15:00-15:30 (30min) › Paris Biofoundry: making biology easier and faster to engineer - Stéphane Lemaire, Biofonderie Sorbonne université 15:30-16:00 (30min) Coffee break 16:00 - 16:30 (30min) Coffee break Amphi Sophie Germain Tools and techniques, methodology (Design & Build) 16:30 - 17:30 (1h) Tools and techniques, methodology (Design & Build) Amphi Sophie Germain Gilles Truan › A new method to distinguish protein acetylation coming from acetyl-phosphate or acetyl-CoA in Escherichia coli - Sandrine Uttenweiler, METASYS - Integrated metabolism and dynamics of metabolic systems 16:30-17:00 (30min) › Conjugative-killer plasmids, a novel antimicrobial alternative - Pedro Dorado-Morales, Unité Plasticité du Génome Bactérien, CNRS UMR 3525, Institut Pasteur, 28 rue du Dr Roux, 75015 Paris, France 17:00-17:30 (30min) Frontier topics : Synthetic cell compartments 17:30 - 18:15 (45min) Frontier topics : Synthetic cell compartments Amphi Sophie Germain Gilles Truan › Microfluidic cell-free protein synthesis - Nadanai Laohakunakorn, University of Edinburgh 17:30-18:15 (45min) Posters 18:45 - 19:30 (45min) Posters Marie and Pierre Curie space Cocktail 19:30 - 21:30 (2h) Cocktail Marie and Pierre Curie space	Experimental systems (Test & Learn) 9:00 - 10:15 (1h15) Experimental systems (Test & Learn) Amphi Sophie Germain Geof Baldwin › Microbial consortia : « the whole is greater than the sum of the parts”. - Marie-Thérèse Giudici-Orticoni, Laboratoire de Bioénergétique et ingénierie des protéines, IMM 09:00-09:45 (45min) › Adding automation and reactiveness to your experiments: motivation, tools and applications to cybergenetics - Gregory Batt, Inria and Institut Pasteur 09:45-10:15 (30min) Coffee break 10:15 - 10:45 (30min) Coffee break Amphi Sophie Germain Experimental systems (Test & Learn) 10:45 - 11:45 (1h) Experimental systems (Test & Learn) Amphi Sophie Germain Geof Baldwin › Chimeric transcriptional regulators to improve non-native substrate assimilation - Yannick BERNARD-LAPEYRE, INRAE 10:45-11:15 (30min) › Development of a cell-free system for bacterial genomes expression to explore transcriptional landscapes of non-cultivable bacteria - Léa Wagner, MICrobiologie de l'ALImentation au Service de la Santé 11:15-11:45 (30min) Frontier topics : Machine learning for designing macromolecules, circuits and strains 11:45 - 12:30 (45min) Frontier topics : Machine learning for designing macromolecules, circuits and strains Amphi Sophie Germain Magali Remaud-Siméon › Computational design of functional protein repertoires - Fleishman Fleishman, Weizmann Institute of Science 11:45-12:30 (45min) Lunch 12:30 - 14:00 (1h30) Lunch Marie and Pierre Curie space Missions and applications 14:00 - 15:45 (1h45) Missions and applications Amphi Sophie Germain Marie-Thérèse Giudici-Orticoni › In vivo directed evolution of [FeFe] hydrogenase variants in a home-tailored E. coli strain - Isabelle Meynial-Salles, TBI-INSA/INRAE/CNRS 14:45-15:15 (30min) › Sensigut: bacterial biosensors for daily and long-term monitoring of targeted gut metabolites - ANA Zuniga, Centre de Biologie Structurale [Montpellier] 15:15-15:45 (30min) Coffee break 15:45 - 16:15 (30min) Coffee break Amphi Sophie Germain Missions and applications 16:15 - 17:45 (1h30) Missions and applications Amphi Sophie Germain Marie-Thérèse Giudici-Orticoni › Synthetic biology for producing value-added molecules in Yarrowia lipolytica - Young Kyoung Park, INRAE, Imperial College London 16:15-16:45 (30min) › An integrase toolbox to record gene-expression during plant development - Sarah Guiziou, Earlham Institute [Norwich] 16:45-17:15 (30min) › A cell-free strategy for profiling of intracellular antibiotic sensitivity and resistance - Kameshwari Chengan, University of Kent [Canterbury], Queen Mary University of London 17:15-17:45 (30min) Frontier topics : Multicellular communities 17:45 - 18:30 (45min) Frontier topics : Multicellular communities Amphi Sophie Germain Victor de Lorenzo › What I learned from kefir microbiome - Kiran Patil, University of Cambridge [UK] 17:45-18:30 (45min) Free time / Posters 18:30 - 20:00 (1h30) Free time / Posters Marie and Pierre Curie space Banquet 20:00 - 22:00 (2h) Banquet	Frontier topics : Synthetic cell compartments 9:00 - 9:30 (30min) Frontier topics : Synthetic cell compartments Amphi Sophie Germain Gilles Truan › Molecular evolution of a synthetic DNA replicator - Christophe Danelon, TU Delft, Toulouse Biotechnology Institute (TBI - INSA) 09:00-09:30 (30min) Frontier topics : Multicellular communities 9:30 - 10:00 (30min) Frontier topics : Multicellular communities Amphi Sophie Germain Gilles Truan › Construction and directed evolution of B. subtilis synthetic consortia - Nathalie Laforge, SyBER 09:30-10:00 (30min) Coffee break 10:00 - 10:30 (30min) Coffee break Frontier topics : Multicellular communities 10:30 - 11:00 (30min) Frontier topics : Multicellular communities Amphi Sophie Germain Gilles Truan › A story of manipulation: Gut microbiota influencing host behavior - Cassandra Backes, Bioénergétique et Ingénierie des Protéines 10:30-11:00 (30min) Experimental systems (Test & Learn) 11:00 - 11:30 (30min) Experimental systems (Test & Learn) Amphi Sophie Germain Gilles Truan › From toxic waste to beneficial nutrient: acetate boosts E. coli growth at low glycolytic flux - Thomas Gosselin-Monplaisir, Toulouse Biotechnology Institute 11:00-11:30 (30min) Frontier topics : Synthetic cell compartments 11:30 - 12:15 (45min) Frontier topics : Synthetic cell compartments Amphi Sophie Germain Gilles Truan

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